Petebankhead.github.io Website Review

Creating annotations for the central region, inner margin and outer margin Part 2: A proposed change to help with using multiple clas*ifications in QuPath Improved image support (again) - including for 32-bit multichannel Vectra images Tips for setting cutoff thresholds to determine positive cells to match visual estimates Print the methods & fields as*ociated with an object, as a quick help when writing scripts. For every image in a project, count the total number of objects, the total number of annotations, & the number of annotations split by Different ways to trace contours.. and what they mean. Important for writing new QuPath algorithms (e.g. for cell detection), or exchanging Export annotated regions as binary masks. Also, create new annotations from binary masks. Do real, customizable image processing with QuPath & ImageJ. Grab regions, apply color deconvolution, detect & measure stained Enter the world of ImageJ, grabbing pixels as ImagePlus objects for further processing. Also: an introduction to QuPath data structures & methods for accessing pixels generally. Identify and address out-of-memory troubles when an*lyzing large images. Merge together the results from the previous script, to get one mega results table. Export all the measurements for all the annotations in a project, in an orderly way. Discover QuPath through scripting. Or discover scripting through QuPath. An overdue update on QuPath: What it is, where it's from & where it's going.